Machine learning scientist or engineer

The Max Delbrück Center for Molecular Medicine (MDC) in the Helmholtz Association is an international biomedical research center dedicated to understanding the molecular mechanisms of health and disease with the goal to devise new diagnostics and medicines. The MDC is a member of the Helmholtz Association, Germany’s largest scientific organization, and offers an engaging research environment with cutting-edge research infrastructure. Currently, ~1250 employees and ~500 guest scientists work at the Berlin-Buch and Berlin-Mitte campuses. Our diverse workforce is a core strength that inspires creativity and innovation at the MDC.

The MDC is committed to improving human health through transformative biomedical research. Our goal is to pioneer discoveries for preventing, treating, and ultimately curing disease.

We are currently seeking a highly motivated and experienced Machine Learning Scientist or engineer with experience or interest in biological data analysis to join our team. The successful candidate will be working on a project focused on clinical decision making and omics analysis. This is a translational project that aims to validate the utility of our AI-enabled platforms for biomedical research.

Responsibilities:

• Use Large Language Models and other foundation models in the context of clinical and omics data.
• Develop and implement machine learning algorithms for the analysis of large-scale omics data, including genomic, transcriptomic, and proteomic data.
• Work with experimental scientists to design and execute experiments to validate drug targets and biomarkers discovered through machine learning.
• Collaborate with other team members to integrate and interpret data from multiple sources.
• Present research findings at internal and external meetings and conferences.
• Contribute to the publication of scientific papers in high-impact journals.
• Contribute to grant applications or other funding applications to further the project.

Requirements:

• PhD in Computer Science, Bioinformatics, Math, Chemical Engineering, or a related field with a focus on machine learning. Or BSc in a quantitative field (Statistics, Computer Science, Bioinformatics, Chemical Engineering) with demonstrated experience in deep learning applications in the life sciences domain.
• Experience in the analysis of large-scale omics data, including genomic, transcriptomic, and proteomic data is needed for at least one position.
• Experience with cloud infrastructure and tool deployment on cloud, particularly AWS, is a plus.
• Strong programming skills in Python and experience with machine learning libraries such as scikit-learn and/or PyTorch.
• Strong verbal and written communication skills and the ability to work effectively in a collaborative team environment.
• Strong problem-solving and analytical skills and the ability to think creatively.

This is an exciting opportunity to work in an innovative and dynamic research environment and make a significant impact in the field of precision medicine and cancer research.

We offer:

• International working environment with communication in English and German.
• Interesting career opportunities and a range of opportunities for further qualification and training.
• Compatibility of family and career certified by the workandfamily audit (“berufundfamilie audit”).
• Support for „New Berliners“ through the MDC Welcome & Family Office.

You also benefit from:

• A remuneration in accordance with the collective agreement for the federal public service (TVöD-Bund), including additional company pension schemes.
• Flexible working hours and childcare support.
• A secure job.
• Subsidy for the job ticket.
• Additional health benefits such as flu vaccination, eye test, ergonomics advice at the workplace.
• The possibility of mobile working.

Application Period:
February 28, 2025

Workplace:
MDC Berlin-Mitte

Salary:
The position will be funded according to German TVÖD up to E13 (Bund) based on experience and qualification.

Employment volume:
Full Time

Desired starting date:
April 01, 2025

Limitation:
Fixed Term
The position is limited for 2 years and 9 months.

Contact:
Sabrina Deter
AG Akalin, Bioinformatics

Commitment to Equity, Diversity and Inclusion:
MDC values diversity and is committed to fostering an inclusive, fair and open environment that allows everyone to grow and flourish. All qualified applicants will receive equitable consideration for employment based on their experience and qualifications, and will not be discriminated against on the basis of national or ethnic origin, religion, sexual orientation, gender identity, disability, age, or other personal characteristics. We recognize that creating diverse teams that represent a broad range of experiences, perspectives, and backgrounds strengthen our work and research. We welcome applications from open-minded people who embrace working together in a diverse environment. Applications from severely disabled people will be given particular consideration.

Application:
Please use our online portal and submit your application including a cover letter, CV (without photo, age and information about your family status) and other relevant attachments.
If you have a foreign degree, please submit proof of the recognition of your Master’s degree in Germany with your application. The proof can be determined via the anabin database and can be submitted as a PDF attachment to the application. Further information can be found at Recognition of Degrees and Achievements .

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